CDS

Accession Number TCMCG017C32974
gbkey CDS
Protein Id OMO56107.1
Location complement(join(9870..9979,10079..10172,10444..10559,10651..10684,10776..10887,11037..11119,11200..11268,11366..11746))
GeneID InterPro:IPR003617
Organism Corchorus olitorius
locus_tag COLO4_35774

Protein

Length 332aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01022791.1
Definition hypothetical protein COLO4_35774 [Corchorus olitorius]
Locus_tag COLO4_35774

EGGNOG-MAPPER Annotation

COG_category K
Description mediator of RNA polymerase II transcription subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006354        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006368        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008023        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070449        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATATAGATGATTTCAGAGCAATTCTTGAAACTGCTAAGGTCGATGTCTGGACATTTATTGACACAGCAATCCTGGTTGCTTCATTGGATAATGGGCAGGAGCTGAAGCAACAGAGAGATAGAATTGTGGAGAGGCTTTATGCAATGTCTATGGTTGATCAGTGTAGAAATTGTGAATTTGGTGAGAAACCAAGTGACCGTGAAGTGAAAGCTGATTTGAAAACAGAGAGTAGCCATGAAAATAAAAAAACAGGGGTATCACCAATTACACCACAATCAGATAACAGGGATAATGATTTGGATCCATATGGGGGCTTGTTTGATGATGAACAAAAGAGGATTCTTGAAATTAAGGAGCGTCTTGGGGAACCTAATCAGTCTGAAGATTCTCTGATTGATTTGCTTCAAGGCTTAGAAGACATGAACGTCACATTCCAAACTCTCAAGGAGACTGATATTGGAAGGCAAGTGAACAACTTGAGGAAGCATTCATCAAATGATGTTCGGAAATTAGTAAAGCAACTTGTCAGGAAATGGAAGGAAATTGTTGATGAATGGGTGAGCTTGAATGAACCTGGAGAATTAGAACCAGCTGATGGAGACTTTCCCCCACAAAAACTCCCTCAAAATAGTTCCAATAAGGTTCCTGACTTGGCATACACCCCTAGTCCACTCAATGGGAGTTCTGGCTCAGACAAGAATACTTCAGAACCAGAAAGGAAGATAAAGTTGATTATACATCGAAAAGAGCCCCCAACTAAACCTACTTGCTCAGCCCCTGTGCTACAAAATAGACAGAGAGAACAGAAGGAAAGCAATTTTGACTCCGAAAGACTAGCTTTAGCTAGAAAAAGGCTTCAAGAAAATTACAAAGAAGCTCAAAATGCCAAAAGGCAGAGAACAATTCAAGTGATGGACATTCACGAGCTACCCAAACCCAAGACTGCTGCCTTTGGAAAGAACAGAGCTGGCAATTCTCAAAGGAGACATTGGTGA
Protein:  
MDIDDFRAILETAKVDVWTFIDTAILVASLDNGQELKQQRDRIVERLYAMSMVDQCRNCEFGEKPSDREVKADLKTESSHENKKTGVSPITPQSDNRDNDLDPYGGLFDDEQKRILEIKERLGEPNQSEDSLIDLLQGLEDMNVTFQTLKETDIGRQVNNLRKHSSNDVRKLVKQLVRKWKEIVDEWVSLNEPGELEPADGDFPPQKLPQNSSNKVPDLAYTPSPLNGSSGSDKNTSEPERKIKLIIHRKEPPTKPTCSAPVLQNRQREQKESNFDSERLALARKRLQENYKEAQNAKRQRTIQVMDIHELPKPKTAAFGKNRAGNSQRRHW